STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3AY50_LATCHRetinol saturase (all-trans-retinol 13,14-reductase). (515 aa)    
Predicted Functional Partners:
DHRS3
Dehydrogenase/reductase 3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.922
LOC102354914
Si:ch211-107o10.3; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.917
LOC102349654
Zgc:153441; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.917
RDH12
Retinol dehydrogenase 12; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.917
H3B2Z1_LATCH
Uncharacterized protein.
  
 
 0.915
LOC102359768
Dehydrogenase/reductase (SDR family) member 4.
  
 
 0.915
RDH8
Retinol dehydrogenase 8a; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.913
RDH10
Retinol dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.913
LOC102364708
Uncharacterized protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.913
LOC102355922
Zmp:0000001048; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
 
 0.913
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.