STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IGF2BP3Insulin like growth factor 2 mRNA binding protein 3. (481 aa)    
Predicted Functional Partners:
LIN28B
Lin-28 homolog B.
   
 
 0.621
CPSF4
Cleavage and polyadenylation specific factor 4.
      
 0.544
CPSF6
Cleavage and polyadenylation specific factor 6.
    
 
 0.539
CPSF2
Cleavage and polyadenylation specificity factor subunit 2.
      
 0.539
CPSF7
Cleavage and polyadenylation specific factor 7.
    
 
 0.537
HNRNPM
Heterogeneous nuclear ribonucleoprotein M.
    
 
 0.525
CPSF3
Cleavage and polyadenylation specific factor 3.
      
 0.523
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
    
 
 0.481
HNRNPC
RRM domain-containing protein.
    
 
 0.466
HNRNPD
Heterogeneous nuclear ribonucleoprotein D.
   
 
 0.454
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.