STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TENT5BUncharacterized protein. (394 aa)    
Predicted Functional Partners:
BCCIP
Protein BCCIP homolog; Belongs to the BCP1 family.
    
 
 0.820
MTO1
Mitochondrial tRNA translation optimization 1.
    
 
 0.804
EIF6
Eukaryotic translation initiation factor 6; Binds to the 60S ribosomal subunit and prevents its association with the 40S ribosomal subunit to form the 80S initiation complex in the cytoplasm. May also be involved in ribosome biogenesis.
      
 0.757
PLK4
Polo like kinase 4.
    
 
 0.734
HDLBP
Uncharacterized protein.
    
 
 0.713
RNF14
RBR-type E3 ubiquitin transferase.
      
 0.697
YWHAZ
14_3_3 domain-containing protein; Belongs to the 14-3-3 family.
      
 0.695
CXXC5
CXXC finger protein 5.
      
 0.668
ATXN1
Ataxin 1.
    
 
 0.549
PABPC4
Polyadenylate-binding protein; Binds the poly(A) tail of mRNA. Belongs to the polyadenylate-binding protein type-1 family.
   
 
 0.529
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.