STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZNF541Uncharacterized protein. (1385 aa)    
Predicted Functional Partners:
DNTTIP1
Deoxynucleotidyltransferase terminal interacting protein 1.
    
 
 0.896
KCTD19
Potassium channel tetramerization domain containing 19.
  
   
 0.746
CCDC51
Coiled-coil domain containing 51.
      
 0.699
ARHGAP23
Rho GTPase activating protein 23.
      
 0.623
RPS6KL1
Ribosomal protein S6 kinase like 1.
   
  
 0.563
IFT140
Intraflagellar transport 140.
      
 0.548
ADAMTS18
ADAM metallopeptidase with thrombospondin type 1 motif 18.
      
 0.510
ARAP1
ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 1.
      
 0.499
POLD1
DNA polymerase.
      
 0.440
PWWP2B
PWWP domain containing 2B.
      
 0.438
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.