STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RAB27BRAB27B, member RAS oncogene family. (220 aa)    
Predicted Functional Partners:
MLPH
Melanophilin.
    
 
 0.837
H3A535_LATCH
CHM Rab escort protein.
    
 0.756
MADD
MAP kinase activating death domain.
     
 0.743
SYTL4
Synaptotagmin like 4.
   
 
 0.686
RABGGTA
Rab geranylgeranyltransferase subunit alpha.
     
 0.663
H3B8F0_LATCH
Uncharacterized protein.
    
 
 0.662
SYTL2
Synaptotagmin like 2.
    
 
 0.662
SYTL5
Synaptotagmin like 5.
   
 
 0.653
CD63
Tetraspanin.
     
 0.647
LOC102361629
Uncharacterized protein.
    
 
 0.588
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.