Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ANKS4B | H3A478_LATCH | ENSLACP00000010746 | ENSLACP00000004449 | Ankyrin repeat and sterile alpha motif domain containing 4B. | PDZ domain-containing protein. | 0.402 |
ANKS4B | H3AIG1_LATCH | ENSLACP00000010746 | ENSLACP00000009432 | Ankyrin repeat and sterile alpha motif domain containing 4B. | Uncharacterized protein. | 0.402 |
ANKS4B | MYO10 | ENSLACP00000010746 | ENSLACP00000015267 | Ankyrin repeat and sterile alpha motif domain containing 4B. | Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.612 |
ANKS4B | USH1C | ENSLACP00000010746 | ENSLACP00000018193 | Ankyrin repeat and sterile alpha motif domain containing 4B. | USH1 protein network component harmonin. | 0.969 |
H3A478_LATCH | ANKS4B | ENSLACP00000004449 | ENSLACP00000010746 | PDZ domain-containing protein. | Ankyrin repeat and sterile alpha motif domain containing 4B. | 0.402 |
H3A478_LATCH | H3AIG1_LATCH | ENSLACP00000004449 | ENSLACP00000009432 | PDZ domain-containing protein. | Uncharacterized protein. | 0.899 |
H3A478_LATCH | MYO10 | ENSLACP00000004449 | ENSLACP00000015267 | PDZ domain-containing protein. | Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.555 |
H3A478_LATCH | USH1C | ENSLACP00000004449 | ENSLACP00000018193 | PDZ domain-containing protein. | USH1 protein network component harmonin. | 0.472 |
H3A478_LATCH | USH1G | ENSLACP00000004449 | ENSLACP00000012126 | PDZ domain-containing protein. | USH1 protein network component sans. | 0.595 |
H3AGE3_LATCH | MYO10 | ENSLACP00000008714 | ENSLACP00000015267 | Uncharacterized protein. | Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.612 |
H3AIG1_LATCH | ANKS4B | ENSLACP00000009432 | ENSLACP00000010746 | Uncharacterized protein. | Ankyrin repeat and sterile alpha motif domain containing 4B. | 0.402 |
H3AIG1_LATCH | H3A478_LATCH | ENSLACP00000009432 | ENSLACP00000004449 | Uncharacterized protein. | PDZ domain-containing protein. | 0.899 |
H3AIG1_LATCH | MYO10 | ENSLACP00000009432 | ENSLACP00000015267 | Uncharacterized protein. | Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.555 |
H3AIG1_LATCH | USH1C | ENSLACP00000009432 | ENSLACP00000018193 | Uncharacterized protein. | USH1 protein network component harmonin. | 0.472 |
H3AIG1_LATCH | USH1G | ENSLACP00000009432 | ENSLACP00000012126 | Uncharacterized protein. | USH1 protein network component sans. | 0.595 |
H3AQC0_LATCH | MYO10 | ENSLACP00000011841 | ENSLACP00000015267 | Uncharacterized protein. | Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.612 |
MRE11 | MYO10 | ENSLACP00000004618 | ENSLACP00000015267 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | 0.574 |
MRE11 | S1PR1 | ENSLACP00000004618 | ENSLACP00000003083 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | Sphingosine-1-phosphate receptor 1. | 0.502 |
MRE11 | SENP1 | ENSLACP00000004618 | ENSLACP00000021732 | Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing. | SUMO specific peptidase 1. | 0.601 |
MYO10 | ANKS4B | ENSLACP00000015267 | ENSLACP00000010746 | Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. | Ankyrin repeat and sterile alpha motif domain containing 4B. | 0.612 |
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