STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYO10Myosin X; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family. (1542 aa)    
Predicted Functional Partners:
USH1C
USH1 protein network component harmonin.
   
 0.632
H3AGE3_LATCH
Uncharacterized protein.
    
 0.612
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
   
 0.612
H3AQC0_LATCH
Uncharacterized protein.
    
 0.612
USH1G
USH1 protein network component sans.
   
 0.612
MRE11
Double-strand break repair protein; Involved in DNA double-strand break repair (DSBR). Possesses single-strand endonuclease activity and double-strand-specific 3'-5' exonuclease activity. Also involved in meiotic DSB processing.
      
 0.574
S1PR1
Sphingosine-1-phosphate receptor 1.
      
 0.570
SENP1
SUMO specific peptidase 1.
      
 0.570
H3A478_LATCH
PDZ domain-containing protein.
    
 0.555
H3AIG1_LATCH
Uncharacterized protein.
    
 0.555
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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