STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPM2Transient receptor potential cation channel subfamily M member 2. (1473 aa)    
Predicted Functional Partners:
TRPC5
Transient receptor potential cation channel subfamily C member 5.
    
 0.801
H2ZZT3_LATCH
Si:ch73-193i2.2; Belongs to the transient receptor (TC 1.A.4) family.
     
0.750
TRPA1
Transient receptor potential cation channel subfamily A member 1; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.750
H3A0G5_LATCH
Uncharacterized protein.
      
 0.702
MCOLN1
Mucolipin 1.
     
 0.673
MCOLN2
Mucolipin 2.
     
 0.673
MCOLN3
Mucolipin 3.
     
 0.673
TRPV4
Transient receptor potential cation channel subfamily V member 4; Belongs to the transient receptor (TC 1.A.4) family.
     
 0.546
PARG
Poly(ADP-ribose) glycohydrolase.
      
 0.539
LOC102362716
Poly (ADP-ribose) glycohydrolase, like.
      
 0.539
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.