STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTPRGProtein tyrosine phosphatase receptor type G. (1221 aa)    
Predicted Functional Partners:
H3A2M8_LATCH
Alpha-carbonic anhydrase domain-containing protein; Belongs to the alpha-carbonic anhydrase family.
 
  
   0.906
CNTN3
Contactin 3.
    
 0.842
CNTN4
Contactin 4.
    
 0.842
CNTN5
Contactin 5.
    
 0.799
CNTN2
Contactin 2.
    
 0.746
CNTN1
Contactin 1.
    
 0.712
CIB3
Calcium and integrin binding family member 3.
      
 0.693
NRCAM
Neuronal cell adhesion molecule.
    
 0.689
CHL1
Cell adhesion molecule L1 like.
    
 0.689
L1CAM
L1 cell adhesion molecule.
    
 0.689
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.