STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B0U5_LATCHPept_C1 domain-containing protein; Belongs to the peptidase C1 family. (436 aa)    
Predicted Functional Partners:
LMAN1
Lectin, mannose binding 1.
     
 0.629
LGMN
Legumain.
   
 
 0.624
MCFD2
Multiple coagulation factor deficiency 2.
     
 0.591
STX17
Syntaxin 17.
   
 
 0.585
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
    
 0.573
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
     
 0.570
AGT
SERPIN domain-containing protein; Belongs to the serpin family.
    
 0.569
CTSZ
Cathepsin Z; Belongs to the peptidase C1 family.
   
0.565
GOLGA2
Golgin A2.
   
 
  0.559
F8
Coagulation factor VIII; Belongs to the multicopper oxidase family.
   
 
 0.558
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.