STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B0Z8_LATCHUncharacterized protein. (136 aa)    
Predicted Functional Partners:
THSD7A
Thrombospondin type 1 domain containing 7A.
      
 0.557
PRR35
Proline rich 35.
      
 0.531
RRP36
Ribosomal RNA processing 36.
      
 0.512
KLHDC8B
Kelch domain containing 8B.
      
 0.507
KBTBD12
Kelch repeat and BTB domain containing 12.
      
 0.489
KCNG3
Potassium voltage-gated channel modifier subfamily G member 3; Belongs to the potassium channel family.
      
 0.476
SIPA1L2
Signal induced proliferation associated 1 like 2.
      
 0.476
RAB11FIP3
RAB11 family interacting protein 3.
      
 0.475
TRAPPC6B
Trafficking protein particle complex 6B.
      
 0.472
DNASE2B
Deoxyribonuclease 2 beta.
      
 0.424
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.