STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TAP2Transporter associated with antigen processing, subunit type a. (720 aa)    
Predicted Functional Partners:
TAP1
Transporter 1, ATP-binding cassette, sub-family B (MDR/TAP).
  
0.998
ABCB9
ATP binding cassette subfamily B member 9.
  
0.984
TAPBP
Uncharacterized protein.
   
 0.971
PDIA3
Protein disulfide-isomerase.
   
 0.962
CALR3
Calreticulin.
   
 0.947
LOC106706091
Uncharacterized protein.
   
 0.939
PSMB6
Proteasome subunit beta.
 
 
 0.789
PSMB9
Proteasome subunit beta.
 
 
 0.775
PSMD11
Proteasome 26S subunit, non-ATPase 11.
   
 
 0.732
PSMB4
Proteasome subunit beta; Belongs to the peptidase T1B family.
     
 0.714
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.