STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B1T2_LATCHUncharacterized protein; Belongs to the peptidase C19 family. (643 aa)    
Predicted Functional Partners:
CCP110
Centriolar coiled-coil protein 110.
    
 0.584
MYSM1
Myb like, SWIRM and MPN domains 1.
   
 
 0.567
YARS1
Tyrosine--tRNA ligase.
      
 0.552
MRPS9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.550
LAP3
Leucine aminopeptidase 3.
    
 0.544
RPS2
Ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
    
 
 0.543
LOC102356981
Uncharacterized protein.
   
 
 0.537
MRPL11
Mitochondrial ribosomal protein L11; Belongs to the universal ribosomal protein uL11 family.
   
 
 0.534
MRPL21
Mitochondrial ribosomal protein L21.
   
 
 0.528
ADRB2
Adrenoceptor beta 2.
    
 0.521
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.