STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PLCD1Phosphoinositide phospholipase C. (689 aa)    
Predicted Functional Partners:
PIP4K2B
Phosphatidylinositol-5-phosphate 4-kinase type 2 beta.
   
 0.927
PIP5K1A
Phosphatidylinositol-4-phosphate 5-kinase type 1 alpha.
   
 0.926
PIP5K1B
Phosphatidylinositol-4-phosphate 5-kinase type 1 beta.
   
 0.926
INPP5A
Inositol polyphosphate-5-phosphatase A.
   
 
 0.912
IPMK
Kinase; Belongs to the inositol phosphokinase (IPK) family.
    
 0.911
ITPR3
Inositol 1,4,5-trisphosphate receptor type 3.
   
 
 0.908
PRKCB
Protein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily.
   
 
 0.907
PRKCA
Protein kinase C alpha; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family.
   
 
 0.907
LOC102348007
Phosphoinositide-3-kinase, regulatory subunit 3b (gamma).
     
  0.905
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
     
  0.905
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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