STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMDDystrophin. (1218 aa)    
Predicted Functional Partners:
DMD-2
Uncharacterized protein.
 
      0.899
NOS1AP
Uncharacterized protein.
      
 0.701
SSPN
Sarcospan.
      
 0.637
LOC102347576
SH3 domain-containing protein.
     
 0.617
SNTA1
Syntrophin alpha 1.
    
 
 0.598
H3AFZ1_LATCH
Peptidase S72 domain-containing protein.
    
 0.577
COL6A6
Collagen type VI alpha 6 chain.
      
 0.577
DAG1
Dystroglycan 1.
    
 0.577
CTNNAL1
Catenin alpha like 1.
   
 
 0.563
SGCA
Sarcoglycan alpha.
    
 
 0.527
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.