STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102362768DDE_Tnp_1_7 domain-containing protein. (553 aa)    
Predicted Functional Partners:
DHDH
Dihydrodiol dehydrogenase.
   
 
 0.520
ND4
NADH-ubiquinone oxidoreductase chain 4; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone (By similarity).
    
 
 0.450
MRPL19
Mitochondrial ribosomal protein L19.
    
   0.440
MRPS11
Mitochondrial ribosomal protein S11; Belongs to the universal ribosomal protein uS11 family.
    
 
 0.438
MRPS10
Mitochondrial ribosomal protein S10.
    
 
 0.433
MRPL44
Mitochondrial ribosomal protein L44.
    
 
 0.433
MRPL15
Mitochondrial ribosomal protein L15.
   
 
 0.428
MRPL16
Mitochondrial ribosomal protein L16; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.423
MRPL23
Mitochondrial ribosomal protein L23.
   
   0.415
MRPL36
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
   
   0.414
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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