STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CYGBCytoglobin; Belongs to the globin family. (179 aa)    
Predicted Functional Partners:
ADGB
Calpain catalytic domain-containing protein; Belongs to the peptidase C2 family.
   
 
 0.867
CYB5R4
Cytochrome b5 reductase 4.
   
 0.707
SPHK1
Sphingosine kinase 1.
      
 0.630
GBE1
1,4-alpha-glucan branching enzyme 1.
      
 0.625
RHBDF2
Rhomboid 5 homolog 2.
 
 
  
 0.621
METTL23
Methyltransferase like 23.
    
 
 0.609
PRPSAP1
Phosphoribosyl pyrophosphate synthetase associated protein 1.
      
 0.607
H3B5A0_LATCH
Fibronectin type-III domain-containing protein.
   
  
 0.566
MB
Myoglobin; Serves as a reserve supply of oxygen and facilitates the movement of oxygen within muscles.
      
0.506
JMJD6
Jumonji domain containing 6, arginine demethylase and lysine hydroxylase.
      
 0.452
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.