STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B4V2_LATCHUncharacterized protein. (279 aa)    
Predicted Functional Partners:
UNC79
Unc-79 homolog, NALCN channel complex subunit.
    
 0.829
LOC102345465
Uncharacterized protein.
    
 0.585
H3AN32_LATCH
Uncharacterized protein.
    
 0.585
KDM6A
Lysine (K)-specific demethylase 6A.
    
 0.494
KDM6B
Lysine demethylase 6B.
    
 0.494
H2ZWQ9_LATCH
WD_REPEATS_REGION domain-containing protein.
   
 0.482
ASH2L
ASH2 like, histone lysine methyltransferase complex subunit.
    
 0.473
RBBP5
RB binding protein 5, histone lysine methyltransferase complex subunit.
    
 0.473
ZFAND4
Zinc finger AN1-type containing 4.
   
  0.437
NUP107
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.433
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.