STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
WDR41WD repeat domain 41. (456 aa)    
Predicted Functional Partners:
SMCR8
SMCR8-C9orf72 complex subunit.
    
 0.996
C9orf72
C9orf72-SMCR8 complex subunit.
    
 
 0.991
RAB39B
Uncharacterized protein.
     
 0.939
RAB8A
RAB8A, member RAS oncogene family.
     
 0.912
LOC102348731
RAB42, member RAS oncogene family.
     
  0.900
LOC102349001
Uncharacterized protein.
     
  0.900
LOC102365114
Uncharacterized protein.
   
 0.809
FZR1
Fizzy and cell division cycle 20 related 1.
   
 0.809
CDC20
Cell division cycle 20.
   
 0.809
CDC20B
Cell division cycle 20B.
   
 0.809
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.