STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAF2Fas associated factor family member 2. (445 aa)    
Predicted Functional Partners:
UBXN7
UBX domain-containing protein 7.
    
 
 0.986
VCP
Valosin containing protein.
   
 0.982
UFD1
Ubiquitin recognition factor in ER associated degradation 1.
    
 
 0.979
UBXN1
UBX domain protein 1.
   
 
 0.973
LOC102365663
Zgc:136908; Belongs to the AAA ATPase family.
   
 0.943
BAG6
BCL2 associated athanogene 6.
    
 
 0.926
PLAA
Phospholipase A2 activating protein.
   
 
 0.887
NPLOC4
NPL4 homolog, ubiquitin recognition factor.
   
 
 0.855
FAAP100
FA core complex associated protein 100.
   
 
 0.855
SEL1L
SEL1L adaptor subunit of ERAD E3 ubiquitin ligase.
   
 
 0.819
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.