STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B5L7_LATCHUncharacterized protein. (173 aa)    
Predicted Functional Partners:
CLSTN2
Uncharacterized protein.
 
     0.917
ZFYVE21
Kinesin light chain 1a.
    
 
 0.572
KLC4
Kinesin light chain 4.
    
 
 0.572
KLC2
TPR_REGION domain-containing protein.
    
 
 0.572
H3B340_LATCH
Uncharacterized protein.
    
 
 0.572
NMNAT3
Nicotinamide-nucleotide adenylyltransferase.
   
  
 0.556
NPHP3
Nephronophthisis 3.
    
 
 0.504
H3B976_LATCH
Uncharacterized protein.
      
 0.452
TMEM52
Transmembrane protein 52.
      
 0.424
LRFN2
Leucine rich repeat and fibronectin type III domain containing 2.
      
 0.420
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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