STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B5P8_LATCHZNRF_3_ecto domain-containing protein. (60 aa)    
Predicted Functional Partners:
RSPO1
R-spondin 1.
   
 0.861
LGR5
Leucine rich repeat containing G protein-coupled receptor 5.
    
 0.729
LGR4
Leucine rich repeat containing G protein-coupled receptor 4.
    
 0.729
RSPO3
R-spondin 3.
   
 0.664
RPS27A
Ribosomal protein S27a.
    
 0.623
LOC102350907
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.575
KXD1
Ubiquitin-like domain-containing protein.
    
 0.575
TRIP12
Thyroid hormone receptor interactor 12.
   
 
 0.531
UBE2K
Ubiquitin conjugating enzyme E2 K; Belongs to the ubiquitin-conjugating enzyme family.
   
 0.508
LRTM1
Leucine rich repeats and transmembrane domains 1.
    
  0.503
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.