STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC63Uncharacterized protein. (561 aa)    
Predicted Functional Partners:
CCDC151
Coiled-coil domain containing 151.
  
 0.762
TTC25
Tetratricopeptide repeat domain 25.
   
 
 0.680
ARMC3
Armadillo repeat containing 3.
   
 
 0.640
RSPH4A
Radial spoke head component 4A.
   
  
 0.640
CCDC40
Coiled-coil domain containing 40.
   
  
 0.636
H3B708_LATCH
Uncharacterized protein.
   
 
 0.630
DRC3
Dynein regulatory complex subunit 3.
   
 
 0.610
EFCAB1
EF-hand calcium binding domain 1.
    
 
 0.588
TEKT5
Tektin 5.
   
 
 0.560
TEKT3
Tektin 3.
   
 
 0.560
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.