STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
HENMT1HEN methyltransferase 1. (370 aa)    
Predicted Functional Partners:
DICER1
Dicer 1, ribonuclease III; Belongs to the helicase family. Dicer subfamily.
   
 
 0.705
PLD6
Phospholipase D family member 6.
      
 0.689
PARN
Poly(A)-specific ribonuclease.
      
 0.686
GTSF1
Gametocyte specific factor 1.
      
 0.623
TDRD9
Tudor domain containing 9.
     
 0.611
ASZ1
Ankyrin repeat, SAM and basic leucine zipper domain containing 1.
     
 0.598
TDRKH
Tudor and KH domain containing.
     
 0.595
HELZ2
Helicase with zinc finger 2.
     
 0.571
FKBP6
Peptidylprolyl isomerase.
      
 0.557
PIWIL2
Piwi like RNA-mediated gene silencing 2; Belongs to the argonaute family.
    
 0.488
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.