STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NIPA1NIPA magnesium transporter 1. (314 aa)    
Predicted Functional Partners:
TUBGCP5
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome; Belongs to the TUBGCP family.
   
  
 0.855
CYFIP1
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
   
  
 0.750
SPG21
SPG21 abhydrolase domain containing, maspardin.
      
 0.594
SPART
Spartin.
   
  
 0.577
IGFBP2
Insulin like growth factor binding protein 2.
      
 0.556
WASHC5
WASH complex subunit 5.
      
 0.552
BAZ1B
Bromodomain adjacent to zinc finger domain 1B.
      
 0.536
H3A6B4_LATCH
Uncharacterized protein.
  
    0.526
SLC33A1
Solute carrier family 33 member 1.
   
  
 0.469
SPG7
SPG7 matrix AAA peptidase subunit, paraplegin.
      
 0.463
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.