STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TSPAN11Tetraspanin. (260 aa)    
Predicted Functional Partners:
GRM3
Glutamate metabotropic receptor 3.
      
 0.750
ITGA3
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
    
 0.746
ITGB4
Integrin beta.
    
 0.672
COL17A1
Collagen type XVII alpha 1 chain.
     
 0.622
SEMA3E
Semaphorin 3E; Belongs to the semaphorin family.
      
 0.615
SEMA3D
Semaphorin 3D; Belongs to the semaphorin family.
   
  
 0.596
ITGA6
Integrin subunit alpha 6; Belongs to the integrin alpha chain family.
    
 0.577
ITGA7
Integrin subunit alpha 7; Belongs to the integrin alpha chain family.
    
 0.577
RIMS1
Regulating synaptic membrane exocytosis 1.
      
 0.570
SHARPIN
Uncharacterized protein.
      
 0.540
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.