STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ANKRD39Ankyrin repeat domain 39. (181 aa)    
Predicted Functional Partners:
BCL3
BCL3 transcription coactivator.
  
     0.517
ASB13
Ankyrin repeat and SOCS box containing 13.
  
     0.497
NFKBIA
Nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha b.
  
     0.497
NFKBIB
NFKB inhibitor beta.
  
     0.495
ANKRD49
Ankyrin repeat domain 49.
  
     0.494
ASB1
Ankyrin repeat and SOCS box containing 1.
  
     0.493
H3AUU2_LATCH
ANK_REP_REGION domain-containing protein.
  
     0.492
H3B155_LATCH
ANK_REP_REGION domain-containing protein.
  
     0.486
ANKRD10
Ankyrin repeat domain 10.
  
     0.460
ANKRD1
Ankyrin repeat domain 1.
 
    
0.456
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.