LSM7 protein (Latimeria chalumnae) - STRING interaction network

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[Homology]

Score

LSM7

LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated. (103 aa)

Predicted Functional Partners:

LSM6

0.999

LSM8

0.999

LSM1

0.999

LSM2

0.999

SNRPD3

0.999

LSM4

0.999

C19orf54

0.999

LSM5

0.999

SNRNP200

0.998

SART3

0.998

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C19orf54	LSM1	ENSLACP00000020157	ENSLACP00000012427	Chromosome 19 open reading frame 54.	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	0.999
C19orf54	LSM2	ENSLACP00000020157	ENSLACP00000017095	Chromosome 19 open reading frame 54.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
C19orf54	LSM4	ENSLACP00000020157	ENSLACP00000018003	Chromosome 19 open reading frame 54.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
C19orf54	LSM5	ENSLACP00000020157	ENSLACP00000022136	Chromosome 19 open reading frame 54.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
C19orf54	LSM6	ENSLACP00000020157	ENSLACP00000007832	Chromosome 19 open reading frame 54.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
C19orf54	LSM7	ENSLACP00000020157	ENSLACP00000017825	Chromosome 19 open reading frame 54.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
C19orf54	LSM8	ENSLACP00000020157	ENSLACP00000011624	Chromosome 19 open reading frame 54.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
C19orf54	SART3	ENSLACP00000020157	ENSLACP00000008373	Chromosome 19 open reading frame 54.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.998
C19orf54	SNRNP200	ENSLACP00000020157	ENSLACP00000000252	Chromosome 19 open reading frame 54.	Small nuclear ribonucleoprotein U5 subunit 200.	0.998
C19orf54	SNRPD3	ENSLACP00000020157	ENSLACP00000017248	Chromosome 19 open reading frame 54.	Small nuclear ribonucleoprotein Sm D3.	0.987
LSM1	C19orf54	ENSLACP00000012427	ENSLACP00000020157	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Chromosome 19 open reading frame 54.	0.999
LSM1	LSM2	ENSLACP00000012427	ENSLACP00000017095	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM1	LSM4	ENSLACP00000012427	ENSLACP00000018003	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.999
LSM1	LSM5	ENSLACP00000012427	ENSLACP00000022136	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.	0.999
LSM1	LSM6	ENSLACP00000012427	ENSLACP00000007832	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
LSM1	LSM7	ENSLACP00000012427	ENSLACP00000017825	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.	0.999
LSM1	LSM8	ENSLACP00000012427	ENSLACP00000011624	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA.	0.991
LSM1	SART3	ENSLACP00000012427	ENSLACP00000008373	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Spliceosome associated factor 3, U4/U6 recycling protein.	0.570
LSM1	SNRPD3	ENSLACP00000012427	ENSLACP00000017248	U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs.	Small nuclear ribonucleoprotein Sm D3.	0.716
LSM2	C19orf54	ENSLACP00000017095	ENSLACP00000020157	U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA.	Chromosome 19 open reading frame 54.	0.999