STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102362564BTB domain-containing protein. (551 aa)    
Predicted Functional Partners:
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.874
RBX1
Ring-box 1.
    
 0.616
NANP
N-acetylneuraminic acid phosphatase.
   
 
 0.594
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.572
RSPH3
Radial spoke head 3.
   
   0.546
MAD2L2
Mitotic arrest deficient 2 like 2.
    
   0.541
UBE2M
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
    
 0.534
UBA3
Ubiquitin like modifier activating enzyme 3.
     
 0.529
NEDD8
NEDD8 ubiquitin like modifier.
    
 0.513
DCUN1D4
DCN1-like protein.
     
 0.509
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.