STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCDNNeurochondrin. (683 aa)    
Predicted Functional Partners:
MMS19
MMS19 homolog, cytosolic iron-sulfur assembly component.
      
 0.816
SHOX
Short stature homeobox.
      
 0.612
ALX1
ALX homeobox 1.
      
 0.582
AAR2
AAR2 splicing factor.
    
 
 0.576
TTC27
Tetratricopeptide repeat domain 27.
    
 
 0.477
HOMER3
Homer scaffold protein 3b.
    
 
 0.470
LOC102351896
RGS domain-containing protein.
      
 0.469
ZNHIT2
Zinc finger HIT-type containing 2.
    
 
 0.448
TBC1D22A
TBC1 domain family member 22A.
      
 0.440
EAPP
E2F associated phosphoprotein.
    
 
 0.435
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.