STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H3B7U8_LATCHDDE-1 domain-containing protein. (159 aa)    
Predicted Functional Partners:
H3AS26_LATCH
DDE-1 domain-containing protein.
  
    0.518
H2ZZL1_LATCH
DDE-1 domain-containing protein.
  
     0.504
H3A6S1_LATCH
HTH CENPB-type domain-containing protein.
  
     0.493
H3A303_LATCH
HTH CENPB-type domain-containing protein.
  
     0.481
H3AHD9_LATCH
Uncharacterized protein.
  
     0.473
H3A146_LATCH
HTH CENPB-type domain-containing protein.
  
     0.472
H3AIS9_LATCH
Uncharacterized protein.
  
     0.465
H3AM58_LATCH
Uncharacterized protein.
  
     0.457
H2ZXU3_LATCH
DDE-1 domain-containing protein.
  
     0.453
H3A5Z0_LATCH
HTH CENPB-type domain-containing protein.
  
     0.453
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.