STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102353108CBFD_NFYB_HMF domain-containing protein. (179 aa)    
Predicted Functional Partners:
POLE3
Polymerase (DNA directed), epsilon 3 (p17 subunit).
   
 
0.866
TADA2A
Transcriptional adapter.
    
 0.840
BTAF1
B-TFIID TATA-box binding protein associated factor 1.
    
 
 0.839
TBP
TATA-box binding protein.
    
 
 0.838
TBPL2
TATA-box binding protein like 2.
    
 
 0.838
YEATS2
YEATS domain containing 2.
    
 0.831
KAT14
Lysine acetyltransferase 14.
    
 0.822
MBIP
MAP3K12 binding inhibitory protein 1.
   
 0.804
SGF29
SAGA complex associated factor 29.
    
 0.769
TADA3
Transcriptional adaptor 3.
    
 0.748
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.