STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTLL6Tubulin tyrosine ligase like 6. (520 aa)    
Predicted Functional Partners:
SNX11
Sorting nexin 11.
      
 0.799
CDK5RAP3
CDK5 regulatory subunit associated protein 3.
      
 0.790
NFE2L1
Nuclear factor, erythroid 2 like 1.
      
 0.672
GMNC
Geminin coiled-coil domain containing.
      
 0.655
MCIDAS
Multiciliate differentiation and DNA synthesis associated cell cycle protein.
      
 0.538
RBP4
Retinol binding protein 4; Belongs to the calycin superfamily. Lipocalin family.
      
 0.505
ENKUR
Enkurin, TRPC channel interacting protein.
      
 0.504
LOC102358567
Forkhead box J1b.
      
 0.499
SV2A
Synaptic vesicle glycoprotein 2A.
      
 0.435
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.