STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
USH1CUSH1 protein network component harmonin. (830 aa)    
Predicted Functional Partners:
USH1G
USH1 protein network component sans.
    
 0.988
ANKS4B
Ankyrin repeat and sterile alpha motif domain containing 4B.
    
 0.969
ADGRV1
Adhesion G protein-coupled receptor V1.
    
 
 0.868
H3AUU3_LATCH
Cadherin-related 23.
   
 
 0.809
PCDH15
Protocadherin related 15.
   
 
 0.801
CDH23
Uncharacterized protein.
   
 
 0.794
SERGEF
Secretion regulating guanine nucleotide exchange factor.
    
 
 0.753
ZFC3H1
Zinc finger C3H1-type containing.
      
 0.741
CPNE8
Copine 8.
      
 0.732
CIB2
Calcium and integrin binding family member 2.
    
 
 0.730
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.