H3B8N9_LATCH protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

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[Homology]

Score

H3B8N9_LATCH

Uncharacterized protein. (374 aa)

Predicted Functional Partners:

GSC

0.848

HMX3

0.516

H3ASY4_LATCH

0.516

TAF8

0.476

LRRC57

0.474

NPAT

0.470

ZNF318

0.452

DCTN2

0.426

LSM10

0.422

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCTN2	H3B8N9_LATCH	ENSLACP00000020983	ENSLACP00000018260	Dynactin subunit 2.	Uncharacterized protein.	0.426
GSC	H3B8N9_LATCH	ENSLACP00000005874	ENSLACP00000018260	Goosecoid homeobox.	Uncharacterized protein.	0.848
H3ASY4_LATCH	H3B8N9_LATCH	ENSLACP00000012755	ENSLACP00000018260	H6 family homeobox 4.	Uncharacterized protein.	0.516
H3B8N9_LATCH	DCTN2	ENSLACP00000018260	ENSLACP00000020983	Uncharacterized protein.	Dynactin subunit 2.	0.426
H3B8N9_LATCH	GSC	ENSLACP00000018260	ENSLACP00000005874	Uncharacterized protein.	Goosecoid homeobox.	0.848
H3B8N9_LATCH	H3ASY4_LATCH	ENSLACP00000018260	ENSLACP00000012755	Uncharacterized protein.	H6 family homeobox 4.	0.516
H3B8N9_LATCH	HMX3	ENSLACP00000018260	ENSLACP00000001663	Uncharacterized protein.	H6 family homeobox 3.	0.516
H3B8N9_LATCH	LRRC57	ENSLACP00000018260	ENSLACP00000013921	Uncharacterized protein.	Leucine rich repeat containing 57.	0.474
H3B8N9_LATCH	LSM10	ENSLACP00000018260	ENSLACP00000018050	Uncharacterized protein.	LSM10, U7 small nuclear RNA associated.	0.422
H3B8N9_LATCH	NPAT	ENSLACP00000018260	ENSLACP00000003794	Uncharacterized protein.	Nuclear protein, coactivator of histone transcription.	0.470
H3B8N9_LATCH	TAF8	ENSLACP00000018260	ENSLACP00000015470	Uncharacterized protein.	TATA-box binding protein associated factor 8.	0.476
H3B8N9_LATCH	ZNF318	ENSLACP00000018260	ENSLACP00000001604	Uncharacterized protein.	C2H2-type domain-containing protein.	0.452
HMX3	H3B8N9_LATCH	ENSLACP00000001663	ENSLACP00000018260	H6 family homeobox 3.	Uncharacterized protein.	0.516
LRRC57	H3B8N9_LATCH	ENSLACP00000013921	ENSLACP00000018260	Leucine rich repeat containing 57.	Uncharacterized protein.	0.474
LSM10	H3B8N9_LATCH	ENSLACP00000018050	ENSLACP00000018260	LSM10, U7 small nuclear RNA associated.	Uncharacterized protein.	0.422
LSM10	NPAT	ENSLACP00000018050	ENSLACP00000003794	LSM10, U7 small nuclear RNA associated.	Nuclear protein, coactivator of histone transcription.	0.553
LSM10	ZNF318	ENSLACP00000018050	ENSLACP00000001604	LSM10, U7 small nuclear RNA associated.	C2H2-type domain-containing protein.	0.641
NPAT	H3B8N9_LATCH	ENSLACP00000003794	ENSLACP00000018260	Nuclear protein, coactivator of histone transcription.	Uncharacterized protein.	0.470
NPAT	LSM10	ENSLACP00000003794	ENSLACP00000018050	Nuclear protein, coactivator of histone transcription.	LSM10, U7 small nuclear RNA associated.	0.553
TAF8	H3B8N9_LATCH	ENSLACP00000015470	ENSLACP00000018260	TATA-box binding protein associated factor 8.	Uncharacterized protein.	0.476