STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SYTL2Synaptotagmin like 2. (720 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
     
 0.664
RAB27B
RAB27B, member RAS oncogene family.
    
 
 0.662
RAB27A
RAB27A, member RAS oncogene family.
    
 
 0.662
RIMS2
Regulating synaptic membrane exocytosis 2a.
     
0.559
RIMS2-2
Regulating synaptic membrane exocytosis 2.
     
0.559
LHFPL2
LHFPL tetraspan subfamily member 2.
   
 
 0.503
CASK
Calcium/calmodulin dependent serine protein kinase; Belongs to the MAGUK family.
     
 0.502
MLPH
Melanophilin.
      
 0.456
H3AJ45_LATCH
Uncharacterized protein.
     
 0.451
ITSN1
Intersectin 1 (SH3 domain protein).
     
 0.451
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.