STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TADA1Transcriptional adaptor 1. (266 aa)    
Predicted Functional Partners:
SUPT3H
SPT3 homolog, SAGA and STAGA complex component.
    
 
 0.998
SUPT20H
SPT20 homolog, SAGA complex component.
    
 0.998
TAF12
TATA-box binding protein associated factor 12.
    
 0.998
TAF10
Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family.
    
 
 0.997
TAF9
TATA-box binding protein associated factor 9.
   
 
 0.997
TADA2A
Transcriptional adapter.
    
 0.962
SGF29
SAGA complex associated factor 29.
    
 0.961
TADA3
Transcriptional adaptor 3.
    
 
 0.955
TAF6L
TATA-box binding protein associated factor 6 like.
    
 0.924
USP22
Ubiquitin carboxyl-terminal hydrolase.
    
   0.923
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.