STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TOE1Uncharacterized protein. (143 aa)    
Predicted Functional Partners:
LOC102365561
C3H1-type domain-containing protein.
 
     0.941
DCP2
Decapping mRNA 2.
     
 0.713
EXOSC5
Exosome component 5.
     
 0.568
EXOSC8
Exosome component 8.
     
 0.534
EXOSC9
Exosome component 9.
   
 
 0.532
SNUPN
Snurportin-1; Functions as an U snRNP-specific nuclear import adapter. Involved in the trimethylguanosine (m3G)-cap-dependent nuclear import of U snRNPs. Binds specifically to the terminal m3G-cap U snRNAs. Belongs to the snurportin family.
    
 
 0.521
EXOSC3
Exosome component 3.
     
 0.511
EXOSC7
Exosome component 7.
     
 0.507
EXOSC2
Exosome component 2.
   
 
 0.502
EXOSC4
Exosome component 4.
     
 0.500
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.