STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIMP2TIMP metallopeptidase inhibitor 2. (221 aa)    
Predicted Functional Partners:
MMP14
Matrix metallopeptidase 14.
   
 0.993
MMP15
Matrix metallopeptidase 15b.
   
 0.955
MMP13
Matrix metallopeptidase 13.
   
 0.929
MMP9
Matrix metallopeptidase 9.
   
 0.917
MMP24
Matrix metallopeptidase 24.
   
 0.828
MMP16
Matrix metallopeptidase 16.
   
 0.825
MMP17
Matrix metallopeptidase 17.
   
 0.745
MMP21
Matrix metallopeptidase 21; Belongs to the peptidase M10A family.
   
 0.729
LOC102348367
ZnMc domain-containing protein; Belongs to the peptidase M10A family.
   
 0.729
MMP19
Matrix metallopeptidase 19.
   
 0.729
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.