STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRKCQProtein kinase C; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. PKC subfamily. (707 aa)    
Predicted Functional Partners:
CARD11
Caspase recruitment domain family member 11.
   
 0.861
PDPK1
3-phosphoinositide dependent protein kinase 1.
    
0.763
ELAVL1
ELAV-like protein; Belongs to the RRM elav family.
    
 0.753
CARD9
Caspase recruitment domain family member 9.
   
 
 0.674
TRAF6
TNF receptor-associated factor; Belongs to the TNF receptor-associated factor family.
    
 0.645
EZR
Ezrin.
   
 
 0.626
CASP3
Caspase 3; Belongs to the peptidase C14A family.
    
 0.621
LOC102367521
Uncharacterized protein; Belongs to the peptidase C14A family.
    
 0.621
H3B6K7_LATCH
IKKbetaNEMObind domain-containing protein.
    
 0.586
PHKA2
Phosphorylase b kinase regulatory subunit; Phosphorylase b kinase catalyzes the phosphorylation of serine in certain substrates, including troponin I. Belongs to the phosphorylase b kinase regulatory chain family.
      
 0.571
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.