Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BRMS1 | SUDS3 | ENSLACP00000015147 | ENSLACP00000004052 | BRMS1 transcriptional repressor and anoikis regulator. | SDS3 homolog, SIN3A corepressor complex component. | 0.715 |
BRMS1 | USP36 | ENSLACP00000015147 | ENSLACP00000018781 | BRMS1 transcriptional repressor and anoikis regulator. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.553 |
BRMS1L | SUDS3 | ENSLACP00000019753 | ENSLACP00000004052 | BRMS1 like transcriptional repressor. | SDS3 homolog, SIN3A corepressor complex component. | 0.710 |
BRMS1L | USP36 | ENSLACP00000019753 | ENSLACP00000018781 | BRMS1 like transcriptional repressor. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.553 |
CDC25B | USP36 | ENSLACP00000007077 | ENSLACP00000018781 | Cell division cycle 25B. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.507 |
CDC25C | USP36 | ENSLACP00000019899 | ENSLACP00000018781 | Cell division cycle 25C. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.507 |
DHX58 | USP36 | ENSLACP00000012725 | ENSLACP00000018781 | DExH-box helicase 58. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.462 |
LOC102367147 | USP36 | ENSLACP00000015534 | ENSLACP00000018781 | MOSC domain-containing protein. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.457 |
SUDS3 | BRMS1 | ENSLACP00000004052 | ENSLACP00000015147 | SDS3 homolog, SIN3A corepressor complex component. | BRMS1 transcriptional repressor and anoikis regulator. | 0.715 |
SUDS3 | BRMS1L | ENSLACP00000004052 | ENSLACP00000019753 | SDS3 homolog, SIN3A corepressor complex component. | BRMS1 like transcriptional repressor. | 0.710 |
SUDS3 | USP36 | ENSLACP00000004052 | ENSLACP00000018781 | SDS3 homolog, SIN3A corepressor complex component. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.690 |
TP53 | USP10 | ENSLACP00000015915 | ENSLACP00000008994 | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | Ubiquitin carboxyl-terminal hydrolase. | 0.816 |
TP53 | USP36 | ENSLACP00000015915 | ENSLACP00000018781 | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.519 |
TRIP12 | USP36 | ENSLACP00000010629 | ENSLACP00000018781 | Thyroid hormone receptor interactor 12. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.555 |
USP10 | TP53 | ENSLACP00000008994 | ENSLACP00000015915 | Ubiquitin carboxyl-terminal hydrolase. | Cellular tumor antigen p53; Acts as a tumor suppressor in many tumor types; induces growth arrest or apoptosis depending on the physiological circumstances and cell type. Involved in cell cycle regulation as a trans-activator that acts to negatively regulate cell division by controlling a set of genes required for this process. One of the activated genes is an inhibitor of cyclin-dependent kinases. Apoptosis induction seems to be mediated either by stimulation of BAX and FAS antigen expression, or by repression of Bcl-2 expression; Belongs to the p53 family. | 0.816 |
USP10 | USP36 | ENSLACP00000008994 | ENSLACP00000018781 | Ubiquitin carboxyl-terminal hydrolase. | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | 0.522 |
USP36 | BRMS1 | ENSLACP00000018781 | ENSLACP00000015147 | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | BRMS1 transcriptional repressor and anoikis regulator. | 0.553 |
USP36 | BRMS1L | ENSLACP00000018781 | ENSLACP00000019753 | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | BRMS1 like transcriptional repressor. | 0.553 |
USP36 | CDC25B | ENSLACP00000018781 | ENSLACP00000007077 | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | Cell division cycle 25B. | 0.507 |
USP36 | CDC25C | ENSLACP00000018781 | ENSLACP00000019899 | Ubiquitin specific peptidase 36; Belongs to the peptidase C19 family. | Cell division cycle 25C. | 0.507 |
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