STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DMBX1Diencephalon/mesencephalon homeobox 1. (369 aa)    
Predicted Functional Partners:
SIK3
SIK family kinase 3.
      
 0.554
ZIC5
Zic family member 5.
    
 
 0.515
AVPR2
Arginine vasopressin receptor 2.
   
 
 0.435
EFCAB14
EF-hand calcium binding domain 14.
      
 0.424
NEUROG2
Neurogenin 2.
   
  
 0.410
LDB1
LIM domain binding 1.
    
 0.404
LDB2
LIM domain binding 2.
    
 0.404
H3AZN3_LATCH
Uncharacterized protein.
    
 
 0.401
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.