STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFX4Regulatory factor X4. (739 aa)    
Predicted Functional Partners:
MNX1
Motor neuron and pancreas homeobox 1.
      
 0.637
ATR
ATR serine/threonine kinase; Belongs to the PI3/PI4-kinase family.
    
 
 0.604
GGPS1
Geranylgeranyl diphosphate synthase 1; Belongs to the FPP/GGPP synthase family.
      
 0.591
TBX20
T-box transcription factor 20.
   
  
 0.575
NKD2
NKD inhibitor of WNT signaling pathway 2.
      
 0.572
RFXAP
Regulatory factor X associated protein.
    
 
 0.552
CHEK2
Checkpoint kinase 2.
   
 
 0.527
LMX1B
LIM homeobox transcription factor 1 beta.
      
 0.508
LOC102356748
Formyl peptide receptor 1.
      
 0.501
FOXJ1
Forkhead box J1.
    
 
 0.487
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.