STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGPAT31-acylglycerol-3-phosphate O-acyltransferase 3. (380 aa)    
Predicted Functional Partners:
GPAM
Glycerol-3-phosphate acyltransferase 1, mitochondrial.
  
 
 0.584
NHLRC2
NHL repeat containing 2.
    
 0.572
H3B661_LATCH
Elongation of very long chain fatty acids protein.
      
 0.569
AASDH
Aminoadipate-semialdehyde dehydrogenase.
     
 0.554
ACSL4
Acyl-CoA synthetase long chain family member 4.
  
 
 0.543
FUCA1
Alpha-L-fucosidase; Alpha-L-fucosidase is responsible for hydrolyzing the alpha- 1,6-linked fucose joined to the reducing-end N-acetylglucosamine of the carbohydrate moieties of glycoproteins.
      
 0.536
SLC24A5
Solute carrier family 24 member 5; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
  
  
 0.525
CRABP2
Cellular retinoic acid binding protein 2; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
    
 
 0.507
DGKD
Diacylglycerol kinase.
   
  
 0.504
ATP6AP1
ATPase H+ transporting accessory protein 1.
      
 0.501
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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