STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RALGAPA1Ral GTPase activating protein catalytic alpha subunit 1. (2066 aa)    
Predicted Functional Partners:
RALGAPB
Ral GTPase activating protein non-catalytic beta subunit.
   
 0.793
GPN1
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
      
 0.722
BRMS1
BRMS1 transcriptional repressor and anoikis regulator.
      
 0.674
INSM2
INSM transcriptional repressor 2.
 
    
 0.671
FAM91A1
Family with sequence similarity 91 member A1.
     
 0.622
PAQR8
Progestin and adipoQ receptor family member 8.
      
 0.611
RAD54B
Uncharacterized protein.
      
 0.579
KHK
Ketohexokinase.
      
 0.566
RNF7
Ring finger protein 7.
      
 0.540
STMN4
Stathmin; Belongs to the stathmin family.
     
 0.539
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.