LAPTM5 protein (Latimeria chalumnae) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Coexpression

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[Homology]

Score

LAPTM5

Lysosomal protein transmembrane 5. (268 aa)

Predicted Functional Partners:

CD53

0.805

SPI1

0.684

SHISAL2B

0.668

SHISAL2A

0.668

LOC102356478

0.661

WDFY4

0.575

H3AB29_LATCH

0.575

PTPN6

0.506

CDK5

0.502

SASH3

0.474

Your Current Organism:

Latimeria chalumnae

NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CD53	LAPTM5	ENSLACP00000010889	ENSLACP00000019973	Tetraspanin.	Lysosomal protein transmembrane 5.	0.805
CD53	SASH3	ENSLACP00000010889	ENSLACP00000015561	Tetraspanin.	SAM and SH3 domain containing 3.	0.439
CDK5	LAPTM5	ENSLACP00000009607	ENSLACP00000019973	Cyclin dependent kinase 5.	Lysosomal protein transmembrane 5.	0.502
H3AB29_LATCH	LAPTM5	ENSLACP00000006850	ENSLACP00000019973	Uncharacterized protein.	Lysosomal protein transmembrane 5.	0.575
H3AB29_LATCH	WDFY4	ENSLACP00000006850	ENSLACP00000005464	Uncharacterized protein.	Uncharacterized protein.	0.935
LAPTM5	CD53	ENSLACP00000019973	ENSLACP00000010889	Lysosomal protein transmembrane 5.	Tetraspanin.	0.805
LAPTM5	CDK5	ENSLACP00000019973	ENSLACP00000009607	Lysosomal protein transmembrane 5.	Cyclin dependent kinase 5.	0.502
LAPTM5	H3AB29_LATCH	ENSLACP00000019973	ENSLACP00000006850	Lysosomal protein transmembrane 5.	Uncharacterized protein.	0.575
LAPTM5	LOC102356478	ENSLACP00000019973	ENSLACP00000019365	Lysosomal protein transmembrane 5.	Tetraspanin.	0.661
LAPTM5	PTPN6	ENSLACP00000019973	ENSLACP00000002763	Lysosomal protein transmembrane 5.	Protein tyrosine phosphatase non-receptor type 6.	0.506
LAPTM5	SASH3	ENSLACP00000019973	ENSLACP00000015561	Lysosomal protein transmembrane 5.	SAM and SH3 domain containing 3.	0.474
LAPTM5	SHISAL2A	ENSLACP00000019973	ENSLACP00000010928	Lysosomal protein transmembrane 5.	Shisa like 2A.	0.668
LAPTM5	SHISAL2B	ENSLACP00000019973	ENSLACP00000002890	Lysosomal protein transmembrane 5.	Shisa like 2B.	0.668
LAPTM5	SPI1	ENSLACP00000019973	ENSLACP00000021551	Lysosomal protein transmembrane 5.	Spi-1 proto-oncogene.	0.684
LAPTM5	WDFY4	ENSLACP00000019973	ENSLACP00000005464	Lysosomal protein transmembrane 5.	Uncharacterized protein.	0.575
LOC102356478	LAPTM5	ENSLACP00000019365	ENSLACP00000019973	Tetraspanin.	Lysosomal protein transmembrane 5.	0.661
PTPN6	LAPTM5	ENSLACP00000002763	ENSLACP00000019973	Protein tyrosine phosphatase non-receptor type 6.	Lysosomal protein transmembrane 5.	0.506
PTPN6	SASH3	ENSLACP00000002763	ENSLACP00000015561	Protein tyrosine phosphatase non-receptor type 6.	SAM and SH3 domain containing 3.	0.484
SASH3	CD53	ENSLACP00000015561	ENSLACP00000010889	SAM and SH3 domain containing 3.	Tetraspanin.	0.439
SASH3	LAPTM5	ENSLACP00000015561	ENSLACP00000019973	SAM and SH3 domain containing 3.	Lysosomal protein transmembrane 5.	0.474