STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC102365809Si:ch211-113g11.6; Belongs to the semaphorin family. (631 aa)    
Predicted Functional Partners:
H3A2E1_LATCH
Plexin_cytopl domain-containing protein.
    
 0.930
MET
MET proto-oncogene, receptor tyrosine kinase.
    
 0.662
PLXND1
Plexin D1.
    
 0.618
PLXNA3-2
Plexin A3.
    
 0.555
PLXNA1
Plexin A1.
    
 0.555
PLXNA3
Sema domain-containing protein.
    
0.555
LOC102347877
Uncharacterized protein.
    
 0.555
PLXNA2
Plexin A2.
    
0.555
H3AY29_LATCH
Uncharacterized protein.
 
    
 0.544
PLXNB1
Plexin B1.
    
0.502
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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