STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAT2Uncharacterized protein. (1744 aa)    
Predicted Functional Partners:
MTNR1B
Melatonin receptor 1B; Belongs to the G-protein coupled receptor 1 family.
      
 0.810
SLC36A1
Solute carrier family 36 member 1.
      
 0.731
HEPHL1
Uncharacterized protein; Belongs to the multicopper oxidase family.
      
 0.704
DLG2
Guanylate kinase-like domain-containing protein.
      
 0.604
FJX1
Four-jointed box kinase 1.
   
 
 0.587
SNED1-2
Uncharacterized protein.
 
      0.517
LIX1
Limb and CNS expressed 1.
   
 0.513
LIX1L
Limb and CNS expressed 1 like.
   
 0.513
ATN1
Atrophin 1.
    
 0.471
RERE
Arginine-glutamic acid dipeptide repeats.
    
 0.471
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.