STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TTC36Tetratricopeptide repeat domain 36. (216 aa)    
Predicted Functional Partners:
FAH
Fumarylacetoacetase.
   
  
 0.689
HGD
Homogentisate 1,2-dioxygenase.
   
  
 0.655
LOC102364955
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.651
H3BFU5_LATCH
AIP3 domain-containing protein.
      
 0.551
GCC2
GRIP and coiled-coil domain containing 2.
      
 0.471
HPDL
4-hydroxyphenylpyruvate dioxygenase.
   
 
 0.469
HAAO
Uncharacterized protein.
   
  
 0.452
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.