STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NAB2NGFI-A binding protein 2. (482 aa)    
Predicted Functional Partners:
CD99L2
CD99 molecule like 2.
      
 0.709
CHD4
Chromodomain helicase DNA binding protein 4a.
   
 0.686
CHD3
Chromodomain helicase DNA binding protein 3.
   
 0.686
M3XHQ8_LATCH
Uncharacterized protein.
   
 0.686
EGR1
Early growth response protein; Transcriptional regulator. Recognizes and binds to the DNA sequence 5'-GCG(T/G)GGGCG-3'(EGR-site) in the promoter region of target genes. Binds double-stranded target DNA, irrespective of the cytosine methylation status. Regulates the transcription of numerous target genes, and thereby plays an important role in regulating the response to growth factors, DNA damage, and ischemia. Plays a role in the regulation of cell survival, proliferation and cell death. Belongs to the EGR C2H2-type zinc-finger protein family.
   
 0.660
EGR3
Early growth response 3.
   
 0.660
EGR2
Early growth response 2.
   
 0.660
PARG
Poly(ADP-ribose) glycohydrolase.
      
 0.659
H3A728_LATCH
Uncharacterized protein.
   
 0.657
KLF10
Kruppel like factor 10.
    
 0.652
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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