STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BCL7BBAF chromatin remodeling complex subunit BCL7B. (214 aa)    
Predicted Functional Partners:
SS18L1
SS18L1 subunit of BAF chromatin remodeling complex.
    
 
 0.841
WDR53
WD repeat domain 53.
      
 0.705
BRD9
Bromodomain containing 9.
   
 
 0.698
BUD23
BUD23 rRNA methyltransferase and ribosome maturation factor.
      
 0.636
TRIM50
Tripartite motif containing 50.
      
 0.603
GTF2IRD1
GTF2I repeat domain containing 1.
      
 0.599
SMARCB1
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1; Belongs to the SNF5 family.
   
 
 0.568
PBRM1
Polybromo 1.
    
 
 0.563
SS18
SS18 subunit of BAF chromatin remodeling complex.
    
 
 0.557
WDR7
WD repeat domain 7.
      
 0.556
Your Current Organism:
Latimeria chalumnae
NCBI taxonomy Id: 7897
Other names: L. chalumnae, coelacanth
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.